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Ulcerative colitis: functional analysis of the in-depth proteome

report abundance differences between UC and healthy controls and the respective p values for all quantified proteins in the supporting information. From this data set enrichment analysis revealed decreased ... reflected in the abundance and state of proteins, the major functional units in every tissue. The proteomic analysis of colon biopsies affected by UC gives data on these changes at the main site of the

Genome-wide identification and functional analysis of circRNAs in Zea mays

). The GO enrichment and functional analysis of the mRNAs suggested that these 346 circRNAs might participate in diverse biological processes, such as multiple metabolic processes, cellular processes, and ... integral network. Pink nodes represent circRNAs and blue nodes represent miRNAs. The edges represent connected nodes that exist as a correlation. different groups. Then the functional analysis of circRNAs

The transcriptome sequencing and functional analysis of eyestalk ganglions in Chinese mitten crab (Eriocheir sinensis) treated with different photoperiods

were used for further functional analysis. Unigenes functional annotation COG classification was used to analyze unigenes function, and 184,664 unigenes were classified into 25 COG clusters, which were ... -seq analysis Total RNA was extracted using RNAisoTMPlus (TaKaRa) according to manufacturer?s instructions. Qualified total RNA was further purified with a RNeasy micro kit (Cat#74004, QIAGEN, GmBH

Getting Started in Gene Orthology and Functional Analysis

equally important, we focus on the latter in this review: functional analysis of orthologs. A function-oriented ortholog group consists of orthologs that play the same biological role in different species ... . There is a recent analysis that systematically harnesses functional genomics data to examine the accuracy of ortholog predictions [30]. In that work, Altenhoff and Dessimoz made comparisons between OMA

Análise funcional do comportamento autolesivo

detail, 25 applied articles that have used empirical methods of functional analysis and treatments for SIB. RESULTS: The literature reviewed shows that the SIB may depend on presentation of attention ... studies that sought to describe how self-injurious behavior (SIB) is functionally related to environment changes. This description has been called functional analysis and makes it possible, by means of

Tenure, Speech, and the Jeffries Case: A Functional Analysis

Tenure, Speech, and the Jef ries Case: A Functional Analysis Robert J. Spitzer 0 1 Recommended Citation 0 Thi s Article is brought to you for free and open access by the School of Law at 1 Robert J ... . Spitzer , Tenure, Speech , and the Jef ries Case: A Functional Analysis , 15 Pace L. Rev. 111 Available at: http://digitalcommons.pace.edu/plr/vol15/iss1/5 - Tenure, Speech, and the Jeffries Case: A

CCP11 Group Meeting—Towards the Functional Analysis of Microarrays

functional analysis of microarrays. This was part of Manchester BioinformaticsWeek—three consecutive short bioinformatics meetings held in the attractive setting of the Chancellor's Conference Centre at the ... of ideas across the bioinformatics community. The CCP11 meeting shared with MASAMB a strong emphasis on the statistical analysis and interpretation of data ? most often image intensity data

Expression and analysis of the glycosylation properties of recombinant human erythropoietin expressed in Pichia pastoris

size being attributed to the presence of rhEPO glycosylation analogs. A crude functional analysis of the soluble proteins showed that all of the forms were active in vivo. ... precursors into functional erythrocytes when blood oxygen availability is decreased, such as during hypoxia. EPO binds to and activates the receptor on erythroid progenitor cells. The treatment of anemic

Functional Analysis of the Thymic Microenvironment Using Recombinant Single Chain Antibodies

Disease Markers 0278-0240 Functional analysis of the thymic microenvironment using recombinant single chain antibodies D.B. Palmer 0 A. Solomou 0 M.A. Ritter 0 0 Department of Immunology, Division ... epitopes/molecules on thymic epithelium and for the production of recombinant scFv whose small size enhances tissue penetration and therefore their efficacy in functional analysis. MEDIATORS INFLAMMATION

A note on repeated measures analysis for functional data

In this paper, the repeated measures analysis for functional data is considered. The known testing procedures for this problem are based on test statistic being the integral of the difference between ... analysis Hypothesis testing Permutation Repeated measures analysis  1 Introduction In the recent past two decades, the functional data analysis (FDA) dealing with samples of random curves or functions

Physical assessment, spectroscopic and chemometric analysis of starch-based foils with selected functional additives

The paper presents the results of studies related to the impact of functional additives in the form of polylactide (PLA), polyvinyl alcohol (PVA), and keratin hydrolysate (K) on the physical ... , Cracow University of Technology , Krakow , Poland , 6 Department of Analysis and Differential Equations, Faculty of Mathematics and Computer Science, University of Warmia and Mazury , Olsztyn , Poland 1

Analysis of Epichloë festucae small secreted proteins in the interaction with Lolium perenne

protein were chosen for functional analysis based on their high expression in planta compared to in culture and their differential regulation in symbiosis defective E. festucae mutants. All three candidate ... (Fig 2A, S4 Table). A fourth gene, gpiB (EfM3.018200), encoding a putative GPI-anchored protein, was also selected for functional analysis because it had an identical expression profile to sspM, sspN and

A Short Bout of Exercise Prior to Stroke Improves Functional Outcomes by Enhancing Angiogenesis

analysis of the peri-infarct area revealed increased levels of endothelial markers/angiogenesis markers, VEGF, VEGFR-2, and Ang-2, and endothelial progenitor cell marker CD34+ in exercise groups compared ... increased number of surviving cells in the peri-infarct area, with a trend towards prolonged duration of the exercise. Immunofluorescence staining and Western blot analysis of the peri-infarct area revealed

Functional analysis of a triplet deletion in the gene encoding the sodium glucose transporter 3, a potential risk factor for ADHD

-segregating with the clinical phenotype of ADHD. Since mutations in homologous domains of hSGLT1 and hSGLT2 were found to affect intestinal and renal function, respectively, we analyzed the functional ... structure analysis (reviewed by [ 3 ]). Studies with human SGLT1 (hSGLT1) and the model homologue from Vibrio parahaemolyticus (vSGLT) have shown that fully functional transporters are formed by monomeric

Exploring the neuropsychiatric spectrum using high-content functional analysis of single-cell signaling networks

neuropsychiatric spectrum extending from MDD on one end, through BD and SCZ, to ASC on the other end. Network analysis showed that although the pathway structure of the epitopes was broadly preserved across the ... wider signaling network activation. Interestingly, this feature was also shared by ASC and to a lesser extent MDD in the network analysis, suggesting convergent disease mechanisms at the functional level

Functional analysis of the HD-Zip transcription factor genes Oshox12 and Oshox14 in rice

recessive mutation in Vrs1 (HvHox1) changes two-rowed barley to six-rowed barley, which improves yield considerably. The Vrs1 gene encodes an HD-Zip subfamily I transcription factor. Phylogenetic analysis has ... , and thus, characterizing the rice Vrs1 homologs, Oshox12 and Oshox14, is of considerable interest. Here, we report a functional analysis of the HD-Zip I genes Oshox12 and Oshox14 in rice. We analyzed

Functional Movement Analysis Before and After Instrument-Assisted Soft Tissue Mobilization

extensibility; tissue tension; facial adhesion INTRODUCTION It is common knowledge that adequate range of motion within joints is a requirement to produce functional movements in activities of daily living. In ... included 40 participants. Experimental mortality due to injury and loss of interest decreased the participation rate to 25 athletes for the duration of the study. A power analysis was performed, and it was

Pre T-Cell Receptor Alpha (pTα) Expression Patterns and Functional Analysis in Human T-Cell Lymphoblastic Leukemia

Cellular Oncology Pre T-cell receptor alpha (pT?) expression patterns and functional analysis in human T-cell lymphoblastic leukemia Philipp Ivanyi 0 Michael Morgan 0 Wenji Piao 0 Sya N. Ukena 0 ... thymocytes with functional TCR?-chain expression from apoptosis [ 13,23,26 ]. The preTCR, consisting of pT?/TCR?-heterodimer and CD3 molecules, induces a ligand independent survival signal as well as cell

A Versatile Vector Toolkit for Functional Analysis of Rice Genes

-throughput toolkit for functional analysis of rice genes. Vector toolkit; Transient expression; Binary vector; CRISPR/Cas9; Oryza sativa Background Rice (Oryza sativa) is one of the most important food ... , it will accelerate functional studies of genes in rice and other monocots. Results Construction of Vectors for Gene Functional Analysis To construct an efficient vector system (Fig. 1a), we analyzed