A Molecular Dynamics Study
G.U. Journal of Science
22(1): 15-19 (2009)
www.gujs.org
Structures and Energetics of Cu21-Cu71 Clusters:
A Molecular Dynamics Study
Saime Şebnem ÇETĐN1, Süleyman ÖZÇELĐK1♠, Ziya B. GÜVENÇ2
1
Gazi University, Faculty of Arts & Sciences, Department of Physics, 06500, Ankara, TURKEY
2
Çankaya University, Faculty of Engineering & Architecture, Department of Electronic and
Communication Engineering, 06530, Ankara, TURKEY
Received: 24.06.2008 Revised: 22.12.2008 Accepted: 31.12.2008
ABSTRACT
Using Molecular Dynamics and thermal quenching simulations the stable geometrical structures and energies of
Cun (n=21-71) clusters are identified. The interaction between the cluster atoms is modeled by an EmbeddedAtom Potential Surface, Voter and Chen’s version. The stable geometrical structures and energies are obtained
from 500 phase space coordinates generated along high-energy trajectories. The internal energy (about T=2500
K) is above the melting temperature of the Cun clusters. The thermal quenching technique is employed to
remove slowly the internal kinetic energy of the clusters. Because of this slow minimization process the locally
stable isomers are separated from those meta-stable ones.
Key Words: Cu clusters, Cluster Structures, Molecular Dynamics, Computer Simulations.
1. INTRODUCTION
Geometrical structures and energetics of the clusters are
important factors for determining their chemical and
physical properties. Therefore, the structure and
dynamics of small clusters, in particular transition metal
clusters, have been attracted much attention
theoretically [1-16] and experimentally [17-20] in the
last decade. Theoretical calculations can complement
such experimental investigations using ab initio
methods and/or sufficiently accurate interaction
potentials in dynamical simulations to investigate the
structure, dynamics, and reactivity of clusters as a
function of cluster size. A new scientific filed so-called
“nano-science” has been formed by these activities.
Small copper clusters with up to 5 atoms [1] and 10
atoms [2] were studied by using density functional
theory. Decay pathways and dissociation energies of
Cu+ (2≤ n ≤25) cluster were studied experimentally
[19]. Structures and stability of up to 56 atoms of the
copper were employed by Darby et al.[21] using the
many body Gupta potential. In Ref. [14], original
version of the Embedded Atom Model (EAM)
developed by Foiles et al. [16] for fcc metals was
employed in their Molecular Dynamics (MD) study. In
Ref. [14] however, Voter and Chen's version of the
♠
Corresponding author, e-mail:
EAM potential was used to study structures and binding
energies of the lowest energy isomers, and melting
behavior of the Cun, (n=2-23) clusters. We have also
used Voter and Chen’s version of the EAM (see for
details Ref.[22]) in our work. Our focus is on obtaining
the number of stable isomers, average bond lengths, and
magic sizes of the Cun, (n=21-71) in addition to the
lowest energy structures and energetics of the clusters.
In Section 2 the detail of computational procedure is
given. The results and their analyses are discussed in
Section 3, and we conclude with a brief summary.
2. THE POTENTIAL AND COMPUTATIONAL
PROCEDURE
Because of the fitting procedure mentioned above, we
have incorporated the EAM [4] in our studies since
such fitting may increase the validity of this potential in
the finite size range. The stable geometrical structures
of the Cun, n=21-71, clusters are identified using MD
and thermal quenching (TQ) simulations. The clusters
are prepared initially with zero total linear and angular
moment. After that their internal energies are increased
to about T = 2500K. These energies are much higher
than the “melting” temperatures of the Cun clusters.
Along the high-energy trajectories in phase space 500
16
G.U. J. Sci., 22(1):15-19 (2009)/ Saime Şebnem ÇETĐN, Süleyman ÖZÇELĐK♠, Ziya B. GÜVENÇ
independent set of phase space coordinates are selected.
Hamilton’s equations of motion were solved for all the
atoms in the cluster using Hamming’s modified 4th
order predictor-corrector algorithm with a step-size of
1x10-15 s. For each set of the phase space coordinates
the TQ technique is used to remove the internal kinetic
energies of the clusters (the internal kinetic energy of a
cluster is set to zero at every 50 simulation steps, and
the process continues until the energy is completely
removed). Because of this slow minimization process,
clusters cannot stay at the meta-stable locations of the
potential energy surface (PES), and finally, they will be
trapped at the bottom of the PES “wells”. Thus, the
locally stable isomers are separated from meta-stable
ones.
3. RESULTS AND DISCUSSION
The geometries of the most stable isomers of Cun (n =
21-71) clusters, average bond lengths of their stable
isomers and energetics, average interaction energy per
atom of these clusters are obtained. The minimum
energy geometries and energetics of the most stable
copper clusters are given in Figures 1 and 2. As seen the
Cu55 has a structure of shell form (Ih) [21]. The Cu56 is
simply formed by capping one of the faces of this
icosahedral structure.
Cu21
Cu22
Cu23
Cu24
Cu25
Cu26
Cu27
Cu28
Cu29
Cu30
Cu31
Cu32
Cu33
Cu34
Cu35
Cu36
Cu37
Cu38(1)
Cu38(2)
Cu39
Cu40
Cu41
Cu42
Cu44
Cu45
Cu46
Cu43
Cu47
Figure 1. The Minimum energy geometries of the most stable copper clusters n=21-47.
G.U. J. Sci., 22(1):15-19 (2009)/ Saime Şebnem ÇETĐN, Süleyman ÖZÇELĐK♠, Ziya B. GÜVENÇ
17
Cu51
Cu48
Cu49
Cu50
Cu52
Cu53
Cu54
Cu55
Cu58
Cu59
Cu57
Cu56
Cu60
Cu61
Cu62
Cu63
Cu64
Cu65
Cu66
Cu67
Cu68
Cu69
Cu70
Cu71
Figure 2. The minimum energy geometries of the most stable copper clusters n=48-71.
G.U. J. Sci., 22(1):15-19 (2009)/ Saime Şebnem ÇETĐN, Süleyman ÖZÇELĐK♠, Ziya B. GÜVENÇ
The average nearest-neighbor distance for the Cu
clusters n = 21-71 vary between 2.5143Å and 2.5339Å.
As the cluster size increases, the average nearestneighbor distance approaches the bulk value (the bulk
value is 2.56Å for the fcc copper crystal [23]). Obtained
results for binding energies from10 up to 56 atoms of
the cluster are agree with calculated values by Darby et
al [21] using many body Gupta potentials for these size
of the copper clusters.
In order to investigate the relative stabilities of the
clusters we consider here the evolution of the binding
energy per atom (the average interaction energy), Ea,
the first difference energy, ∆E(1), and the second
difference energy, ∆E(2), which are defined in terms of
the total interaction energy of the cluster (Figures 3-5).
3.0
Second Difference Energy(eV/Atom)
18
n=53 n=55
2.0
(c)
1.0
n=29
n=45
n=38
n=59 n=66
0.0
-1.0
-2.0
-3.0
21
31
41
51
61
71
Size,n
Figure 5. The second difference energy ∆E(2)=En+12En+En-1 as a function of the cluster size, n.
Binding Energy (eV/Atom)
-2.6
These energies are defined in terms of the total
interaction energy of the cluster (...truncated)