Erratum to: Large-scale mitochondrial phylogeography in the halophilic fairy shrimp Phallocryptus spinosa (Milne-Edwards, 1840) (Branchiopoda: Anostraca)
Aquat Sci
Erratum to: Large-scale mitochondrial phylogeography in the halophilic fairy shrimp Phallocryptus spinosa (Milne-Edwards, 1840) (Branchiopoda: Anostraca)
0 V. Ketmaier D. Pirollo E. De Matthaeis G. Mura Department of Biology and Biotechnology ''C. Darwin'', Universita' di Roma ''La Sapienza'' , V.le dell'Universita 32, I-00185 Rome , Italy
1 V. Ketmaier (&) R. Tiedemann Unit of Evolutionary Biology/Systematic Zoology, Institute of Biochemistry and Biology, University of Potsdam , Karl-Liebknecht-Strasse 24-25, Haus 26, D-14476 Potsdam , Germany
The three following sequences of the mitochondrial Cytochrome Oxidase subunit I (COI) gene with GenBank Accession Numbers EU236129, EU236130 and EU236131 were erroneously assigned to the fairy shrimp Phallocryptus spinosa (haplotypes L, M and N respectively in the original publication). A BLAST search revealed that they instead match representatives of the cladoceran family Daphniidae (EU236129 and EU236131) and of the copepod family Diaptomidae (EU236130). These sequences will hence be removed from the GenBank database. We hypothesize that the cause of these erroneous amplifications has to be sought in the apparently not so rare occurrence of small crustaceans within the anostracan foliaceous limbs, as posterior microscopic inspections of a variety of ethanol-preserved anostracans confirmed (M. Ventura pers. obs.). We hence recommend to accurately checking anostracans prior to DNA extraction to exclude possible sources of contamination.
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We phylogenetically re-analyzed the data of the original
publication by using alternatively the 16S rRNA gene only
(all haplotypes, including L, M, and N) and the COI?16S
sequences combined but excluding haplotypes L, M, and
N. Both data sets were analyzed with a Bayesian approach
and the GTR?C model of sequence evolution. Analytical
settings were as in the original publication. Figure 1 shows
the resulting trees as well as the original tree published in
the original publication. In the 16S tree haplotypes L and
M firmly cluster together and are nested within clade IV of
the original publication while haplotype N is placed basal
to the whole aforementioned group. Clade I is confirmed.
The 16S?COI tree is the correct tree and should substitute
that presented in the original publication. It is worth noting
that while the deep divergence of the erroneous clades II
and III is certainly an artefact, 16S data still suggest a
certain degree of divergence for haplotypes L, M and N.
The remaining results and conclusions of the original
publication are correct.
Acknowledgments We are deeply grateful to Marc Ventura Oller
(CEAB, Girona, Spain) for having informed us of the mistake detailed
in the present erratum.
Fig. 1 Bayesian haplotype phylogram based on the GTR?C model
for the 16S (left including haplotypes L, M and N) and COI?16S
(right haplotypes L, M and N excluded) datasets. Numbers at nodes
are statistical supports for the Bayesian searches. Only nodes with a
statistical support [75 % are labelled. Haplotype codes match those
in the original publication; roman numbers (IIV) refer to the main
clades identified in the original publication. The insert in the upper
left corner shows a simplified version of the phylogenetic tree
presented in the original paper
(...truncated)