Efficacy of the small molecule inhibitor of Lipid II BAS00127538 against Acinetobacter baumannii
Drug Design, Development and Therapy
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Efficacy of the small molecule inhibitor of Lipid II
BAS00127538 against Acinetobacter baumannii
This article was published in the following Dove Press journal:
Drug Design, Development and Therapy
8 August 2014
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Erik PH de Leeuw
Institute of Human Virology,
University of Maryland School
of Medicine, Baltimore, MD, USA
Introduction
Correspondence: Erik PH de Leeuw
Institute of Human Virology of the
University of Maryland Baltimore School
of Medicine, 725 West Lombard Street,
Baltimore, MD 21201, USA
Tel +1 410 706 1970
Fax +1 410 706 7583
Email
Lipid II is an essential precursor in cell wall biosynthesis, and is a validated antibacterial
drug target. It is comprised of a hydrophilic head group that includes a peptidoglycan
subunit composed of N-acetylglucosamine and N-acetylmuramic acid. The cell wall
of all bacteria comprises this polymer of alternating amino sugars. The peptidoglycan
layer of Gram-negative bacteria is generally much smaller than the Gram-positive cell
wall (1.5 versus ∼20 layers).1
The natural glycopeptide antibiotic vancomycin was the first compound discovered
to kill bacteria by targeting Lipid II. Currently, vancomycin serves as a principal treatment for infections caused by all major Gram-positive pathogens, including methicillinresistant Staphylococcus aureus. However, resistance to vancomycin is increasing
and a number of vancomycin insensitive strains have been described. Two resistance
mechanisms have been described in these strains: affinity trapping of vancomycin by
increased production of cell wall monomers, and change in metabolism and structure
of teichoic acid.2 Reported resistance in clinical isolates resulted from replacing the
carboxy terminal D-alanyl-D-alanine target for vancomycin by D-alanyl-D-lactate.3
Resistance to vancomycin appeared over 20 years, predominantly because vancomycin was reserved as a last resort antibiotic to prolong development of resistance. The
vancomycin derivative telavancin (Vibativ®; Theravance Biopharma US, Inc., South
San Francisco, CA, USA) was approved by the Food and Drug Administration for
complicated skin and skin structure infections in 2009 and more recently for hospitalacquired pneumonia when alternative treatments are not suitable. Two next-generation
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http://dx.doi.org/10.2147/DDDT.S68020
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Objective: To test the activity of a small molecule compound that targets Lipid II against
Acinetobacter baumannii.
Methods: Susceptibility to small molecule Lipid II inhibitor BAS00127538 was assessed
using carbapenem- and colistin-resistant clinical isolates of A. baumannii. In addition, synergy
between colisitin and this compound was assessed.
Results: Small molecule Lipid II inhibitor BAS00127538 potently acts against A. baumannii
and acts synergistically with colistin.
Conclusion: For the first time, a compound that targets Lipid II is described that acts against
multi-drug resistant isolates of A. baumannii. The synergy with colistin warrants further lead
development of BAS00127538.
Keywords: Lipid II, Acinetobacter baumannii, drug development
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de Leeuw
vancomycin-derived glycopeptides that bind Lipid II are
currently in clinical trials: dalbavancin hydrochloride (Durata
Therapeutics, Inc., Chicago, IL, USA) and oritavancin (The
Medicines Company, Parsippany-Troy Hills, NJ, USA).
Resistance against commonly used classical antibiotics
has emerged in all major classes of both Gram-positive and
Gram-negative pathogens, including S. aureus, E
nterococcus
faecium, Pseudomonas aeruginosa, and Acinetobacter
baumannii. 4,5 Multi-drug resistant A. baumannii is an
increasingly important Gram-negative pathogen, particularly
in hospital settings.4 The types of infections caused by this
pathogen include pneumonia, endocarditis, bacteremia, skin
and soft tissue infections, and meningitis.4,6–8 Factors that
contribute to pathogenesis of this organism include iron
acquisition, membrane polysaccharides and vesicles, biofilm
formation, and penicillin-binding proteins.9 We have recently
described small molecule inhibitors of Lipid II for the first
time.10 Our most promising compound, BAS00127538, was
highly active against Gram-positive species and showed activity against Gram-negative species also, albeit reduced. This
compound binds to Lipid II differently than other compounds,
affects cell wall biosynthesis, and showed efficacy in vivo.10
Since vancomycin, dalbavancin, and oritavancin fail to
demonstrate any notable activity against A. baumannii, we
tested activity of our lead small molecule Lipid II inhibitor
BAS00127538 (Figure 1) against this species.
Materials and methods
Strains
Twelve isolates of carbapenem- and/or colistin-sensitive or
resistant A. baumannii were obtained from the Laboratory
of Pathology, University of Maryland Baltimore School
of Medicine (Baltimore, MD, USA). All isolates were
c haracterized by Etest (meropenem) or minimum inhibitory
concentration (MIC) (colistin) according to the Clinical
and Laboratory Standards Institute guidelines as indicated
in Table 1. A. baumannii ATCC 19606 was included as a
reference strain for quality control testing.
Antimicrobial agents
Colistin and meropenem were obtained from LKT
Laboratories, Inc., (St Paul, MN, USA). Vancomycin was
purchased from Sigma-Aldrich Co (St Louis, MO, USA).
BAS00127538 was obtained from Asinex (Winston-Salem,
NC, USA).
Synergy screen
Synergy was determined by checkerboard method.11 The stock
solutions and serial two-fold dilutions of each drug to at least
double the MIC were prepared according to the recommendations of the National Committee for Clinical Laboratory
Standards immediately prior to testing. A total of 50 µL of
Mueller–Hinton broth was distributed into each well of the
microdilution plates. T (...truncated)